Publications by Collaborators

 

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JOURNALS 

2018

• Ong J.C., Pang K.M., Walther J.H., Ho J.H., Ng H.K., Evaluation o f a Lagrangian Soot Tracking Method for the prediction of primary soot particle size under engine-like conditions, Journal of Aerosol Science, 115, 70-95, 2018 (doi) (pdf)
• Szanyi M.L., Hemmingsen C.S., Yan W., Walther J.H., Glimberg S.L., Near-wellbore modeling of a horizontal well with Computational Fluid Dynamics, Journal of Petroleum Science and Engineering, 160, 119-128, 2018 (doi) (pdf) 

   

2017

• Zavadlav J., Praprotnik M., Adaptive resolution simulations coupling atomistic water to dissipative particle dynamics, Journal of Chemical Physics, 147, 114110, 2017 (doi) 

• Hovad E., Larsen P., Spangenberg J., Walther J.H., Thorborg J., Hattel J.H., Cavity prediction in sand mould production applying the DISAMATIC process, Powder Technology, 321, 204-217 (2017) (doi) (pdf)
• Hanasaki I., Walther J.H., Suspended particle transport through constriction channel with Brownian motion, Physical Review E, 96, 023109 (2017) (doi) (pdf)

• Nielsen L.T., Asadzadeh S.S., Dölger J., Walther J.H., Kiørbe T., Andersen A., Hydrodynamics of microbial filter feeding, PNAS, 114, 35, 9373-9378 (2017) (doi) (pdf)
• Fu L., Litvinov S., Hu X.Y., Adams N.A., A novel partitioning method for block-structured adaptive meshes, Journal of Computational Physics, 341, 447-473 (2017) (doi) (pdf)
• Christiansen C.K., Walther J.H., Klit P., Vølund A., Investigation of journal orbit and flow pattern in a dynamically loaded journal bearing, Tribology International, 114, 450-457 (2017) (doi), (pdf)
• Olsen J.J., Hemmingsen C.S., Bergmann L., Nielsen K.K., Glimberg S.L., Walther J.H., Characterization and Erosion Modeling of a Nozzle-Based Inflow-Control Device, SPE Drilling & Completion, 2017, 186090 (doi), (pdf)
• Wagemann E., Oyarzua E., Walther J.H., Zambrano H.A., Slip divergence of water flow in graphene nanochannels: the role of chirality, Phys. Chem. Chem. Phys., 2017, 19, 8646, 1-8, (doi), (pdf)
• Yang Y., Walther J.H., Yan Y., Wen C., CFD modeling of condensation process of water vapor in supersonic flows, Applied Thermal Engineering, 115, pp. 1357-1362 (2017) (doi), (pdf)
• Spietz H.J., Hejlesen M.M., Walther J.H., Iterative Brinkman penalization for simulation of impulsively started flow past a sphere and a circular disc, J. Comput. Phys., 336, pp. 261-274 (2017) (doi), (pdf)
• Pang K.M., Karvounis N., Walther J.H., Schramm J, Glarborg P., Mayer S., Modelling of temporal and spatial evolution of sulphur oxides and sulphuric acid uder large, two-stroke marine engine-like conditions using integrated CFD-chemical kinetics, Applied Energy, 193, pp. 60-73 (2017) (doi), (pdf)
• Rasthofer U., Gravemeier V., Recent Developments in Variational Multiscale Methods for Large-Eddy Simulation of Turbulent Flow, Arch. Computat. Methods Eng., 11831-017-9209-4, pp. 1-44 (2017) (doi), (pdf)
• Kim D., Bowman C., Del Bonis-O’Donnell J.T., Matzavinos A., Stein D., Giant Acceleration of DNA Diffusion in an Array of Entropic Barriers, Phys. Rev. Lett., 118, 048002, pp. 1-5 (2017) (doi), (pdf)
• Andersen A., Bohr T., Schnipper T., Walther J.H., Wake structure and thrust generation of a flapping foil in two-dimensional flow, J. Fluid Mech., 812, R4, pp. 1-12 (2017) (doi), (pdf)

2016

• Azarnykh D., Litvinov S., Bian X., Adams N.A., Determination of macroscopic transport coefficients of a dissipative particle dynamics solvent, Physical Review E, 93(1), p. 013302 (2016) (doi) (pdf)
• Litvinov S., Xie Q., Hu X., Adams N., Ellero M., Simulation of individual polymer chains and polymer solutions with smoothed dissipative particle dynamics, Fluids, 1 pp. 7 (2016) (doi) (pdf)
• Hemmingsen C.S., Ingvorsen K.M., Mayer S., Walther J.H., LES And URANS simulations of the swirling flow in a dynamic model of a uniflow-scavenged cylinder, International Journal of Heat and Fluid Flow, 62, pp. 213-223 (2016) (doi), (pdf)
• Karna N.K., Oyarzua E., Walther J.H., Zambrano H.A., Effect of the meniscus contact angle during early regimes of spontaneous imbibition in nanochannels, Phys. Chem. Chem. Phys., 18, 31997, pp. 1-5 (2016) (doi), (pdf)
• Wen C., Yang Y., Walther J.H., Pang K.M., Feng Y., Effect of delta wing on the particle flow in a novel gas supersonic separator, Powder Technology, 304, pp. 261-267 (2016) (doi), (pdf)
• Hovad E., Spangenberg J., Larsen P., Walther J.H., Thorborg J., Hattel J.H., Simulating the DISAMATIC process using the discrete element method – a dynamical study of granular flow, Powder Technology, Vol. 303, pp. 228-240 (2016) (doi), (pdf)
• Hejlesen M.M., Walther J.H., A multiresolution method for solving the Poisson equation using high order regularization, J. Comput. Phys., Vol. 326, pp. 188-196 (2016) (doi), (pdf)
• Wen C., Li A., Walther J.H., Yang Y., Effect of swirling device on flow behavior in a supersonic separator for natural gas dehydration, Separation and Purification Technology, Vol. 168, pp. 68-73 (2016) (doi), (pdf)
• Zayernouri M, Matzavinos A., Fractional Adams-Bashforth/Moulton methods: An application to the fractional Keller-Segel chemotaxis system, J. Comput. Phys., Vol. 317, pp. 1-14 (2016) (doi), (pdf)
• Mishra S., Schwab C., Sukys J., Multi-level Monte Carlo finite volume methods for uncertainty quantification of acoustic wave propagation in random heterogeneous layered medium, J. Comput. Phys., Vol. 312, pp. 192-217 (2016) (doi), (pdf)
• Pang K.M., Karvounis N., Walther J.H., Schramm J., Numerical investigation of soot formation and oxidation processes under large two-stroke marine diesel engine-like conditions using integrated CFD-chemical kinetics, Applied Energy, Vol. 169, pp. 874-887 (2016) (doi), (pdf)
• Andersen B.O., Nielsen N.F., Walther J.H., Numerical and experimental study of pulse-jet cleaning in fabric filters, Powder Technology, Vol. 291, 284–298 (2016) (doi), (pdf)

• Riisgård H.U., Jørgensen B.H., Lundgreen K., Storti F., Walther J.H., Meyer K.E., Larsen P.S., The exhalant jet of mussels, Mytilus edulis, Marine Ecology Progress Series, 437:147-164, 2011. (Abstract) (pdf)
• Rasmussen J.T., Cottet G.-H., Walther J.H., A multiresolution remeshed vortex-in-cell algorithm using patches, Journal of Computational Physics, 230(17):6742–6755, 2011 (Abstract) (pdf)

• Rasmussen J.T., Hejlesen M.M., Larsen A., Walther J.H., Discrete Vortex Method simulations of the aerodynamic admitance in bridge aerodynamics, J. of. Wind Eng. and Industrial Aerodynamics, 98(12), 754-766, 2010 (Abstract) (pdf)

2009

• Zambrano H.A., Walther J.H., Jaffe R.L.,Thermally driven molecular linear motors: A molecular dynamics study, Journal of Chemical Physics, 131, 241104, 2009 (Abstract) (pdf)
• Walther J.H., Sbalzarini I.F., Large-scale parallel discrete element simulations of granular flow, International Journal for Computer-Aided Engineering and Software, 26, 6, 688-697, 2009 (Abstract) (pdf)

• Morgenthal G., Walther J.H., An Immersed interface method for the Vortex-In-Cell algorithm, Computers & Structures, 85, 11-14, 712-726, 2007 (Abstract) (pdf)

2006

• Hansen N., An analysis of mutative sigma-self-adaptation on linear fitness functions, Evolutionary Computation, 14, 255-275, 2006 (Abstract) (pdf)
• Zimmermann S., Bauer P., Held R., Kinzelbach W., and Walther J.H., Salt transport on islands in the Okavango delta: Numerical investigation, Advances Water Research, 29(1):11-29, 2006 (Abstract) (pdf)

2005

• Luedeke C., Frei S.B., Sbalzarini I.F., Schwarz H., Spang A., Barral Y., Septin-dependent compartmentalization of the endoplasmic reticulum during yeast polarized growth, J. Cell Biology, 169(6), 897-908, 2005 (Abstract) (pdf)

2004

• Gonnet P., Rudd K., Lisacek F., Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted LipoProteins of E. coli K-12, PROTEOMICS, 4(6), 1597-1613, 2004 (Abstract) (pdf)
• Lisacek F., Chichester C., Gonnet P., Jaillet O., Kappus S., Nikitin F., Roland P., Rossier G., Truong L., Appel R., Shaping biological knowledge: applications in proteomics, Comparative and Functional Genomics, 5(2), 190-195, 2004 (Abstract) (pdf)

2003

• Bergdorf M., Peter Ch., Hunenberger P.H., Influence of cut-off truncation and artificial periodicity of electrostatic interactions in molecular simulations of solvated ions: A continuum electrostatics study, J. Chem. Phys. 119, 9129-9144, 2003 (Abstract) (pdf)
• Walther J.H., An influence matrix particle-particle particle-mesh algorithm with exact particle-particle correction, J. Comput. Phys., 184, 670-678, 2003 (Abstract) (pdf)
• Gers F., Schraudolph N.N., Schmidhuber J., Learning precise timing with LSTM recurrent networks, J. Mach. Learn. Res., 3, 115-143, 2003 (Abstract) (pdf)

2002

• Attinger S., Parametrizing macro-dispersivity: first pick a length scale, Hydrol. Proc., 16, 1685-1687, 2002 (Abstract) (pdf)
• Attinger S., Eberhard J., Neuss N., Filtering procedures for flow in heterogeneous porous media: numerical results, Comput. Visual Sci., 2(5), 67-72, 2002 (pdf) (Abstract)
• Dentz M., Kinzelbach H., Attinger S., Kinzelbach W., Temporal behaviour of a solute cloud in a heterogeneous porous medium – 3. Numerical simulations, Water Resour. Res., 38(7), 23-1-23-13, 2002 (Abstract) (pdf)
• Gonnet P., Lisacek F., Probabilistic alignment of motifs with sequences, Bioinformatics 18(8), 1091-1101, 2002 (Abstract) (pdf)
• Herbrich R., Graepel T., A PAC-Bayesian margin bound for linear classifiers, IEEE T. Inform. Theory, 3140-3150, 2002 (Abstract) (pdf)
• Lunati I., Attinger S., Kinzelbach W., Macrodispersivity for transport in arbitrary nonuniform flow fields: asymptotic and preasymptotic results, Water Resour. Res., 38(10), 5-1-5-11, 2002 (Abstract) (pdf)
• Yi P., Poulikakos  D., Walther  J., Yadigaroglu G., Molecular Dynamics simulation of vaporization on an ultra-thin liquid argon layer on a surface, Int. J. Heat Mass Transfer, 45, 2087-2100, 2002 (Abstract) (pdf)
• Schraudolph N.N., Fast curvature matrix-vector products for second-order gradient descent, Neural Computation, 14(7), 1723-1738, 2002 (Abstract) (pdf)
• Stauffer F., Attinger  S., Zimmermann S., Kinzelbach W., Uncertainty estimation of well catchments in heterogeneous aquifers, Water. Resour. Res., 38(11), 20-1-20-8, 2002 (Abstract) (pdf)
• Walther J.H., Morgenthal G., An immersed interface method for the vortex-in-cell algorithm, J. Turbulence, 3, 039, 2002 (Abstract) (pdf)

2001

• Hansen N., Ostermeier  A., Completely derandomized self-adaptation in evolution strategies, Evol. Comput., 9(2), 159-195, 2001 (Abstract) (pdf)
• Werder T., Gerdes K., Schoetzau D., Schwab C., hp-discontinuous galerkin time stepping for parabolic problems, Computer Methods in Applied Mathematics and Engineering, 190(49-50), 6685- 708, 2001 (Abstract) (pdf)

2000

• Bueche D., Sukumar  N., Moran B., Dispersive properties of the natural element method, Comput. Mech., 25(2/3), 207-139, 2000 (Abstract) (pdf)
• Glielmo L., Milano M., Santini S., A machine learning approach to modeling and identification of automotive three-way catalytic converters, IEEE Trans. on Mechatronics, 5(2), 132-141, 2000 (Abstract) (pdf)

1999

• Marino P., Milano M., Vasca F., Linear quadratic state feedback and robust neural network estimator for field oriented controlled induction motors, IEEE Trans. on Industrial Electronics, 46(1), 150-161, 1999 (Abstract) (pdf)

1998

• Larsen A., Walther J.H., Discrete vortex simulation of flow around five generic bridge deck sections, J. Wind Eng. Ind. Aerodyn., 77-78, 591-602, 1998 (Abstract) (pdf)

1997

• Larsen A., Walther J.H., Aeroelastic analysis of bridge sections based on discrete vortex simulations, J. Wind Eng. Ind. Aerodyn., 67-69, 253-265, 1997 (Abstract) (pdf)
• Milano M., Barone F., Milano L., Detection of gravitational waves from coalescing binaries in the time domain, Class. Quantum Grav., 14, 1531-1536, 1997 (Abstract) (pdf)
• Milano M., Barone F., Milano L., Time domain amplitude and frequency detection of gravitational waves from coalescing binaries, Phys. Rev. D, 55(8), 4537-4554, 1997 (Abstract) (pdf)
• Larsen A., Walther J.H., Discrete vortex method for application to bluff body aerodynamics, J. Wind Eng. Ind. Aerodyn., 67-68, 183-193, 1997 (Abstract) (pdf)